Issue :
How to disable access to /whm and /cpanel for all domains except the server hostname?
Solution :
This would need customization of the httpd.conf file.
First, edit the httpd.conf and remove any lines pertaining to forwarding of domains to /cpanel and /whm.
Secondly, run the following command to distill the file :
/usr/local/cpanel/bin/apache_conf_distiller –update –main
Finally, restart Apache.
service httpd restart